Probes/primers found for taxon: Vibrio
| Hit type | Short name | Name (Alm et al.) | Specificity |
|---|---|---|---|
| Exact | G V | Vibrio | |
| Exact | KO 232 | S-*-Vchol-0122-a-A-18 | Vibrio cholerae, V. mimicus |
| Exact | VIB572a | Genus Vibrio | |
| Spec | 687(DSV687) | S-F-Dsv-0687-a-A-16 | Most Desulfovibrionales (excluding Lawsonia) and many Desulfuromonales |
| Spec | 842 | Bdellovibrio spp. | |
| Spec | Ace731 | S-S-0731-a-18 | Rumen Acetivibrio clones |
| Spec | AZV211 | S-G-Azv-0211-a-A-18 | Azovibrio spp. |
| Spec | AZVRE847 | S-*-Azv.re-0847-a-A-18 | Azovibrio restrictus |
| Spec | BDE525 | Genus Bdellovibrio | |
| Spec | Bfi826 | S-S-But-0826-a-18 | Butyrivibrio fibrisolvens-related clones, phylum Firmicutes |
| Spec | But1243 | S-S-But-1243-a-18 | rumen Butyrivibrio clones |
| Spec | buty1 | Butyrivibrio | |
| Spec | DSB623a | S-*-Dsb-0623-a-A-18 | Desulfobacter curvatus, Dsb. halotolerans, Dsb. hydrogenophilus, Dsb. postgatei, Dsb. Vibrioformis |
| Spec | DSBO224 | Desulfobotulus sapovorans, Desulfovibrio fairfieldensis, and other Deltaproteobacteria | |
| Spec | DSD131 (DSVAE131) | S-S-Dsv.ae-0131-a-A-18 | Desulfovibrio aestuarii |
| Spec | DSV (DSV321) | Some Desulfovibrionaceae, Desulfomicrobiaceae, Desulfohalobiaceae, and other Bacteria | |
| Spec | DSV1154 | Desulfovibrio alcoholivorans, D. fructosivorans, D. burkinensis, rice field isolate F1-7b and R-SucA1 | |
| Spec | DSV119 | Desulfovibrio strain L3 | |
| Spec | DSV1292 | S-*-Dsv-1292-a-A-18 | Some Desulfovibrio and Bilophila wadsworthia |
| Spec | DSV139 | Desulfovibrio strain L7 | |
| Spec | DSV185 | Desulfovibrio acrylicus | |
| Spec | DSV407 | Few Desulfovibrionaceae, Desulfohalobiaceae, and Desulfonatronumaceae | |
| Spec | DSV445 | Desulfovibrio strain EtOHK3 | |
| Spec | DSV64 | Desulfovibrio strain EtOHK2 | |
| Spec | DSV651 | S-*-Dsv-0651-a-A-18 | Desulfovibrio fructosivorans, Dsv. alcoholivorans, Dsv. sulfodismutans, Dsv. burkinensis, Dsv. inopinatus |
| Spec | Dsv683 | S-*-Dsv-0683-a-A-22 | Desulfovibrionaceae, metal reducers |
| Spec | DSV686 | S-*-Dsv-0686-a-A-18 | Most Desulfovibrionales and Desulfuromonadales |
| Spec | DSV698 | Some Desulfovibrio, Bilophila wadsworthia, and Lawsonia intracellularis | |
| Spec | DSV820 | S-*-Dsv-0820-a-A-18 | Desulfovibrio salexigens, Dsv. zosterae, Dsv. fairfieldensis, Dsv. intestinalis, Dsv. piger, Dsv. desulfuricans |
| Spec | DSV827 | members of the genus Desulfovibrio | |
| Spec | DVAA1111 | S-*-Dv.a.a-1111-a-A-18 | Desulfovibrio africanus, Dsv. aminophilus |
| Spec | DVDAPC872 | S-*-Dv.d.a.p.c-0872-a-A-18 | Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv.aespoeensis |
| Spec | DVFABS1351 | S-*-Dv.f.a.b.s-1351-a-A-18 | Desulfovibrio fructosivorans, Dsv. alcoholivorans, Dsv. sulfodismutans, Dsv. burkinensis |
| Spec | DVFABS153 | S-*-Dv.f.a.b.s-0153-a-A-18 | Desulfovibrio fructosivorans, Dsv. alcoholivorans, Dsv. sulfodismutans, Dsv. burkinensis |
| Spec | DVFABS653 | S-*-Dv.f.a.b.s-0653-a-A-18 | Desulfovibrio fructosivorans, Dsv. alcoholivorans, Dsv. sulfodismutans, Dsv. burkinensis |
| Spec | DVGL1151 | S-*-Dv.g.l-1151-a-A-18 | Desulfovibrio gracilis, Dsv. longus |
| Spec | DVGL1421 | S-*-Dv.g.l-1421-a-A-18 | Desulfovibrio gracilis, Dsv. longus |
| Spec | DVGL199 | S-*-Dv.g.l-0199-a-A-18 | Desulfovibrio gracilis, Dsv. longus |
| Spec | DVGL228e | Desulfovibrio | |
| Spec | DVGL445 | S-*-Dv.g.l-0445-a-A-18 | Desulfovibrio gracilis, Dsv. longus |
| Spec | DVHO130 | S-*-Dv.h.o-0130-a-A-18 | Desulfovibrio halophilus, Dsv. oxyclinae |
| Spec | DVHO1424 | S-*-Dv.h.o-1424-a-A-18 | Desulfovibrio halophilus, Dsv. oxyclinae |
| Spec | DVHO733 | S-*-Dv.h.o-0733-a-A-18 | Desulfovibrio halophilus, Dsv. oxyclinae |
| Spec | DVHO831 | S-*-Dv.h.o-0831-a-A-18 | Desulfovibrio halophilus, Dsv. oxyclinae |
| Spec | DVIG448 | S-*-Dv.i.g-0448-a-A-18 | Desulfovibrio gabonensis, Dsv. indonesiensis |
| Spec | DVIG468 | S-*-Dv.i.g-0468-a-A-18 | Desulfovibrio gabonensis, Dsv. indonesiensis |
| Spec | DVLT1027 | S-*-Dv.l.t-1027-a-A-18 | Desulfovibrio termitidis, Dsv. longreachensis |
| Spec | DVLT131 | S-*-Dv.l.t-0131-a-A-18 | Desulfovibrio termitidis, Dsv. longreachensis |
| Spec | DVLT986 | S-*-Dv.l.t-0986-a-A-18 | Desulfovibrio termitidis, Dsv. longreachensis |
| Spec | DVLVT139 | S-*-Dv.l.v.t-0139-a-A-18 | Desulfovibrio termitidis, Dsv. longreachensis, Dsv. vulgaris |
| Spec | DVLVT175 | S-*-Dv.l.v.t-0175-a-A-18 | Desulfovibrio termitidis, Dsv. longreachensis, Dsv. vulgaris |
| Spec | DVLVT222f | Desulfovibrio | |
| Spec | DVSZ849 | S-*-Dv.s.z-0849-a-A-18 | Desulfovibrio salexigens, Dsv. zosterae |
| Spec | Enterbact B | some members of the Enterobacteriaceae and Vibrionaceae | |
| Spec | GeoVib1 | Geovibrio and Denitrovibrio | |
| Spec | Hefri3 | Herbaspirilum huttiense, Herbaspirillum putei, Herbaspirillum magnetovibrio | |
| Spec | Hefri4 | Herbaspirilum huttiense, Herbaspirillum putei, Herbaspirillum magnetovibrio | |
| Spec | NTSPA714 | S-*-Ntspa-714-a-A-18 | Phylum Nitrospira, not Thermodesulfovibrio islandicus |
| Spec | Pse1257 | S-S-Pse-1257-18 | Rumen Pseudobutyrivibrio clones |
| Spec | RHC143 | S-*-RHC-0143-a-A-18 | Most members of the Dechloromonas-Ferribacterium-Quadricoccus-Azonexus, the Azospira, and the Rhodocyclus-Propionivibrio-Accumulibacter lineages, Zoogloea spp., and few members of the Azoarcus-Thauera-Denitromonas lineage |
| Spec | RHC175a | S-*-RHC-0175-a-A-18 | Most members of the Dechloromonas-Ferribacterium-Quadricoccus-Azonexus, the Azospira, and the Rhodocyclus-Propionivibrio-Accumulibacter lineages |
| Spec | Rs-N31-197 | S-S-RsN31-0197-a-A-18 | specific for phylotype Rs-N31 (e.g. Can. Desulfovibrio trichonymphae) |
| Spec | SRB385 (SRB) | S-*-Srb-0385-a-A-18 | Most Desulfovibrionales and other Bacteria |
| Spec | Tdsulfo848 (TDSV849) | S-*-Tdsulfo-0848-a-A-18 (S-*-Tdsv-0849-a-A-18) | Most Thermodesulfovibrio and some Magnetobacterium |
| Spec | TDSV1326 | S-*-Tdsv-1326-a-A-18 | Thermodesulfovibrio spp. |
| Spec | TDSV601 | S-*-Tdsv-0601-a-A-18 | Thermodesulfovibrio spp. |
| Spec | TH14 (RHC175b) | S-*-RHC-0175-b-A-18 | Some Thauera, Azoarcus, Zoogloea, Sterolibacterium, and Azovibrio spp. |
| Spec | TH3 (AZTHA222,RHC222) | S-*-RHC-0222-a-A-18 | Some members of the Azoarcus-Thauera-Denitromonas, Zoogloea, and Azovibrio lineages |
| Spec | thia1 | Thialhalivibrio | |
| Spec | V3VV | Vibrio vulnificus | |
| Spec | VaV3 | Vibrio anguillarum | |
| Spec | VIB572b | other Vibrio/Photobacterium | |
| Spec | Vibr1 | Vibrionaceae | |
| Spec | ZnDsv-02-471 | S-S-ZnDv2-0471-a-A-18 | specific for phylotype ZnDsv-02 in genus Desulfovibrio |
