Probes/primers found for taxon: Clostridium
| Hit type | Short name | Name (Alm et al.) | Specificity |
|---|---|---|---|
| Exact | Chis150 | S-*-Chis-0150-a-A-23 | most of the Clostridium histolyticum group (Clostridium cluster I and II) |
| Exact | Clost | Clostridium | |
| Exact | CUE1240 | Group 3 clones (AC014 and AC036), closely related to Clostridium sp. strain XB90 | |
| Exact | KO 226 | S-*-Cbut-0183-a-A-21 | Clostridium butyricum, C. kainantoi |
| Spec | CC-1 | Clostridium clostridiiforme ATCC 29084 GenBank no. (GI) 174147 | |
| Spec | CC-2 | Clostridium clostridiiforme ATCC 29084 GenBank no. (GI) 174147 | |
| Spec | CC-3 | Clostridium clostridiiforme ATCC 29084 GenBank no. (GI) 174147 | |
| Spec | Cinn447 | S-S-Cinn-0447-a-A-18 | Clostridium innocum |
| Spec | CL-1 | Clostridium leptum ATCC 29065 GenBank no. (GI) 12655400 | |
| Spec | CL-2 | Clostridium leptum ATCC 29065 GenBank no. (GI) 12655400 | |
| Spec | CL-3 | Clostridium leptum ATCC 29065 GenBank no. (GI) 12655400 | |
| Spec | Clep866 | S-*-Clep-0866-a-A-18 | members of the Clostridium leptum subgroup |
| Spec | Clept1240 | S-G-Clept-1240-a-A-18 | Clostridium leptum |
| Spec | Clit135 | S-*-Clit-0135-a-A-19 | some of the Clostridium lituseburense group (Clostridium cluster XI) |
| Spec | CLOBU1022 | S-S-Cl.bu.-1022-a-A-18 | Clostridium butyricum, Elbe `river snowapos isolates 9.1, 9.2, 9.4 |
| Spec | Cp1 | Clostridium perfringens | |
| Spec | Cp2 | Clostridium perfringens | |
| Spec | Cp3 | Clostridium perfringens | |
| Spec | Csac67 | S-S-Csac-67-a-A-20 | Clostridium saccharogumia |
| Spec | CST440 | Group 1 clones (AC044 and AC051), closely related to Clostridium stercorarium | |
| Spec | CTH1258 | Group 2 clones (AC020 and AC033), closely related to Clostridium thermocellum | |
| Spec | Cvir1414 | S-*-Cvir-1414-a-A-18 | Clostridium viride cluster |
| Spec | Ecyl387 | Eubacterium cylindroides, Clostridium innocuum, Eubacterium biforme, Eubacterium tortuosum, Eubacterium dolichum, Streptococcus pleomorphus | |
| Spec | Ehal1469 | Eubacterium hallii, Clostridium herbivorans, Clostridium polysaccharolyticum | |
| Spec | Erec482 | S-*-Erec-0482-a-A-19 | most of the Clostridium coccoides-Eubacterium rectale group (Clostridium cluster XIVa and XIVb) |
| Spec | KO 221 | S-S-CfalA-0062-a-A-20 | Clostridium fallax |
| Spec | KO 222 | S-S-CfalB-1443-a-A-19 | Clostridium fallax |
| Spec | KO 223 | S-S-CtetA-0116-a-A-19 | Clostridium tetani |
| Spec | KO 224 | S-S-CtetB-0746-a-A-19 | Clostridium tetani |
| Spec | KO 225 | S-S-Cperf-0185-a-A-20 | Clostridium perfringens |
| Spec | KO 227 | S-S-CdifC-1009-a-A-19 | Clostridium difficle |
| Spec | Rbro730 | S-*-Rbro-0730-a-A-18 | Clostridium sporosphaeroides, Ruminococcus bromii, Clostridium leptum |
