Probe name |
Specificity |
804(Dsb804) | Some Desulfobacteraceae |
814(Dscoc814) | Few Desulfobacteraceae |
cl81-644 | Few Desulfobacteraceae |
D-acet1027r (DFACE1028) | Desulfotomaculum acetoxidans |
660(DBB660) | some Desulfobulbus |
221(DBM221) | Desulfobacterium vacuolatum, D. niacini, D. autotrophicum |
DCC209 | Desulfococcus multivorans |
DCC868 | Desulfosarcina sp., Desulfonema spp., Desulfococcus sp., Desulfobacterium spp., Desulfobotulus sp., Desulfostipes sp., Desulfomusa sp. |
DEM1164r | Desulfotomaculum cluster I and other Firmicutes |
DEM-RC1015r | Desulfotomaculum clone sequences from rice paddy soil |
Dsb220(desulfobacter) | most Desulfobacter |
DFM228 | Desulfotomaculum spp. |
DNMA657 | some Desulfonema |
129(DSB129) | most Desulfobacter |
DSB623 | Desulfobacter spp. |
DSB985 | Desulfobacter, Desulfobacula, Desulfospira, and Desulfotignum |
DSBAC355 | most Desulfobacterales and Syntrophobacterales |
DSBO224 | Desulfobotulus sapovorans, Desulfovibrio fairfieldensis, and other Deltaproteobacteria |
DSC193 | Desulfosarcina variabilis |
DSD131 (DSVAE131) | Desulfovibrio aestuarii |
DSF672 | Desulfofrigus, Desulfofaba gelida, Desulfomusa hansenii |
DSMA488 | Desulfarculus baarsii, Desulfomonile tiedjei, and Syntrophus |
DSR651 | Some Desulfobulbaceae |
DSS225 | Desulfosarcina and many other Desulfobacteraceae |
DSS658 | Desulfobacteraceae and other Bacteria |
DSV1154 | Desulfovibrio alcoholivorans, D. fructosivorans, D. burkinensis, rice field isolate F1-7b and R-SucA1 |
DSV1292 | Some Desulfovibrio and Bilophila wadsworthia |
DSV214 | Most Desulfomicrobium |
DSV407 | Few Desulfovibrionaceae, Desulfohalobiaceae, and Desulfonatronumaceae |
Dsv683 | Desulfovibrionaceae, metal reducers |
687(DSV687) | Most Desulfovibrionales (excluding Lawsonia) and many Desulfuromonales |
DSV698 | Some Desulfovibrio, Bilophila wadsworthia, and Lawsonia intracellularis |
Dtm(a)229 | Desulfotomaculum cluster Ia |
Dtm(bcd)230 | Many Desulfotomaculum cluster I and other Firmicutes |
Dtm(be)152 | Desulfotomaculum cluster Ib and Ie |
Dtm(c)428 | Desulfotomaculum cluster Ic |
Dtm(cd)216 | Desulfotomaculum cluster Ic and Id |
Dtm229 | Desulfotomaculum cluster I and other Firmicutes |
SRB385 (SRB) | Most Desulfovibrionales and other Bacteria |
SRB385Db | Desulfobacterales, Desulfuromonales, Syntrophobacterales, Myxococcales, and other Bacteria |
Sval428 | Some Desulfobulbaceae (excluding most Desulfobulbus |
SYN835 | Syntrophobacter, Desulforhabdus |
DSM194 | Desulfomicrobium spp., Desulfobacterium macestii |
DSM213 | Desulfomicrobium |
DSHRE830 | Desulfohalobium retbaense |
DSHRE995 | Desulfohalobium retbaense |
DSHRE1243 | Desulfohalobium retbaense |
DFMI227a | Desulfotomaculum putei, Dfm. gibsoniae, Dfm. geothermicum, Dfm. thermosapovorans, Dfm. thermoacidovorans, Dfm. thermobenzoicum, Dfm. thermoacetoxidans, Dfm. australicum, Dfm. kuznetsovii, Dfm. thermocisternum, Dfm. luciae, Sporotomaculum hydroxybenzoicum |
DFMI227b | Desulfotomaculum aeronauticum, Dfm. nigrificans, Dfm. reducens, Dfm. ruminis, Dfm. sapomandens, Dfm. halophilum |
DFMI210 | some Desulfotomaculum spp. of clusters Ic and Id |
DFMI229 | some Desulfotomaculum spp. of clusters Ib, Ic, and Id |
DFMIa641 | Desulfotomaculum spp. (cluster Ia) |
DFMIb726 | Desulfotomaculum spp., Sporotomaculum spp. (cluster Ib) |
DFMIc841 | Desulfotomaculum spp. (cluster Ic) |
DFMIc1012 | Desulfotomaculum spp. (cluster Ic) |
DFMIc1119 | Desulfotomaculum spp. (cluster Ic) |
DFMIc1138 | Desulfotomaculum spp. (cluster Ic) |
DFMId436 | Desulfotomaculum spp. (cluster Id) |
DFMId625 | Desulfotomaculum spp. (cluster Id) |
DFMId996 | Desulfotomaculum spp. (cluster Id) |
DFMId1117 | Desulfotomaculum spp. (cluster Id) |
DFACE199 | Desulfotomaculum spp. (cluster Ie) |
DELTA495a | Most Deltaproteobacteria and most Gemmatimonadetes |
DELTA495b | some Deltaproteobacteria |
DELTA495c | some Deltaproteobacteria |
DSB706 | Most Desulfobulbaceae and Thermodesulforhabdus |
DSB230 | Desulfotalea-Desulforhopalus-Desulfocapsa-Desulfofustis lineage |
DSTAL131 | Desulfotalea spp. |
DSTAL213 | Desulfotalea spp. |
DSTAL645 | Desulfotalea spp. |
DSTAL732 | Desulfotalea spp. |
DSTAL835 | Desulfotalea spp. |
DSRHP185 | Desulforhopalus spp. |
DSBB228 | Desulfobulbus spp. |
DSBB660 | Desulfobulbus spp. |
DSB986 | Desulfobacter spp., Desulfobacula sp., Desulfobacterium sp., Desulfospira sp., Desulfotignum sp. |
DSB1030 | Desulfobacter spp., Desulfobacula sp., Desulfobacterium sp., Desulfospira sp., Desulfotignum sp. |
DSB1240 | Desulfobacter spp., Desulfotignum sp. |
DSB623a | Desulfobacter curvatus, Dsb. halotolerans, Dsb. hydrogenophilus, Dsb. postgatei, Dsb. Vibrioformis |
DSB623b | Desulfobacter sp. BG8, Dsb. sp. BG23 |
DSBLA623 | Desulfobacter latus |
DSBACL143 | Desulfobacula spp. |
DSBACL225 | Desulfobacula spp. |
DSBACL317 | Desulfobacula spp. |
DSBACL1268 | Desulfobacula spp. |
DSBACL1434 | Desulfobacula spp. |
DSB674 | Desulfofrigus spp., Desulfofaba gelida, Desulfomusa hansenii |
DSB220 | Desulfobacterium niacini, Dsbm. vacuolatum, Dsbm. autotrophicum, Desulfofaba gelida |
DSBM1239 | Desulfobacterium niacini, Dsbm. vacuolatum, Dsbm. autotrophicum |
DSFRG211 | Desulfofrigus spp. |
DSFRG445 | Desulfofrigus spp. |
DSFRG1030 | Desulfofrigus spp. |
DSSDBM194 | Desulfosarcina variabilis, Desulfobacterium cetonicum |
DSSDBM217 | Desulfosarcina variabilis, Desulfobacterium cetonicum |
DSSDBM998 | Desulfosarcina variabilis, Desulfobacterium cetonicum |
DSSDBM1286 | Desulfosarcina variabilis, Desulfobacterium cetonicum |
DSBMIN218 | Desulfobacterium indolicum |
DSNISH179 | Desulfonema ishimotonii |
DSNISH442 | Desulfonema ishimotonii |
DSNISH1001 | Desulfonema ishimotonii |
DSN658 | Desulfonema limicola, Dsn. magnum |
DSBOSA445 | Desulfobotulus sapovorans |
DSMON95 | Desulfomonile spp. |
DSMON1421 | Desulfomonile spp. |
SYBAC986 | Desulfovirga spp., Desulforhabdus spp., Syntrophobacter spp. |
DSACI175 | Desulfacinum spp. |
DSACI207 | Desulfacinum spp. |
TDRNO448 | Thermodesulforhabdus norvegica |
TDRNO1030 | Thermodesulforhabdus norvegica |
TDRNO1443 | Thermodesulforhabdus norvegica |
DSV686 | Most Desulfovibrionales and Desulfuromonadales |
DSV698 | Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv. aespoeensis, Dsv. halophilus, Dsv. gracilis, Dsv. longus, Dsv. salexigens, Dsv. zosterae, Dsv. bastinii, Dsv. fairfieldensis, Dsv. intestinalis, Dsv. piger, Dsv. desulfuricans, Dsv |
DVDAPC872 | Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv.aespoeensis |
DVHO130 | Desulfovibrio halophilus, Dsv. oxyclinae |
DVHO733 | Desulfovibrio halophilus, Dsv. oxyclinae |
DVHO831 | Desulfovibrio halophilus, Dsv. oxyclinae |
DVHO1424 | Desulfovibrio halophilus, Dsv. oxyclinae |
DVAA1111 | Desulfovibrio africanus, Dsv. aminophilus |
DVGL199 | Desulfovibrio gracilis, Dsv. longus |
DVGL445 | Desulfovibrio gracilis, Dsv. longus |
DVGL1151 | Desulfovibrio gracilis, Dsv. longus |
DVGL1421 | Desulfovibrio gracilis, Dsv. longus |
DSV820 | Desulfovibrio salexigens, Dsv. zosterae, Dsv. fairfieldensis, Dsv. intestinalis, Dsv. piger, Dsv. desulfuricans |
DVSZ849 | Desulfovibrio salexigens, Dsv. zosterae |
DVIG448 | Desulfovibrio gabonensis, Dsv. indonesiensis |
DVIG468 | Desulfovibrio gabonensis, Dsv. indonesiensis |
DSV651 | Desulfovibrio fructosivorans, Dsv. alcoholivorans, Dsv. sulfodismutans, Dsv. burkinensis, Dsv. inopinatus |
DVFABS153 | Desulfovibrio fructosivorans, Dsv. alcoholivorans, Dsv. sulfodismutans, Dsv. burkinensis |
DVFABS653 | Desulfovibrio fructosivorans, Dsv. alcoholivorans, Dsv. sulfodismutans, Dsv. burkinensis |
DVFABS1351 | Desulfovibrio fructosivorans, Dsv. alcoholivorans, Dsv. sulfodismutans, Dsv. burkinensis |
DVLVT139 | Desulfovibrio termitidis, Dsv. longreachensis, Dsv. vulgaris |
DVLVT175 | Desulfovibrio termitidis, Dsv. longreachensis, Dsv. vulgaris |
DVLT131 | Desulfovibrio termitidis, Dsv. longreachensis |
DVLT986 | Desulfovibrio termitidis, Dsv. longreachensis |
DVLT1027 | Desulfovibrio termitidis, Dsv. longreachensis |
DFACE438 | Desulfotomaculum spp. (cluster Ie) |
DFACE995 | Desulfotomaculum spp. (cluster Ie) |
DFACE1436 | Desulfotomaculum spp. (cluster Ie) |
DFMIf126 | Desulfotomaculum spp. (cluster If) |
DFMII1107 | Desulfosporosinus spp., Desulfotomaculum auripigmentum (cluster II) |
DFMII1281 | Desulfosporosinus spp., Desulfotomaculum auripigmentum (cluster II) |
TDSV601 | Thermodesulfovibrio spp. |
Tdsulfo848 (TDSV849) | Most Thermodesulfovibrio and some Magnetobacterium |
TDSV1326 | Thermodesulfovibrio spp. |
TDSBM1282 | Thermodesulfobacterium spp., Geothermobacterium sp. |
TDSBM353 | Thermodesulfobacterium spp. |
TDSBM652 | Thermodesulfobacterium spp. |
ARGLO37 | Archaeoglobus spp. |
ARGLO276 | Archaeoglobus spp. |
ARGLO576 | Archaeoglobus spp. |
ARGLO972 | Archaeoglobus spp. |
Tsrda641 | Desulfobacteraceae DGGE clone T1 |
Tsrda644 | Desulfobacteraceae DGGE clone T1 |
Edsrb656 | Desulfobacteraceae DGGE clone E2 |
SYBAC697 | Desulforhabdus spp., Desulfovirga spp., Syntrophobacter spp. |
SYBAC587a | Uncultured Syntrophobacter-related bacteria (Schlöppnerbrunnen I soil clones SbISybac13, 15, and 19 Schlöppnerbrunnen II soil clones SbIISybac12-1, 1-2, 3-2, and 13-2) |
SYBAC587b | Uncultured Syntrophobacter-related bacteria (Schlöppnerbrunnen I soil clones SbISybac16 Schlöppnerbrunnen II soil clones SbIISybac25-1, 6-2, and 8-2) |
DSMON999 | Uncultured Desulfomonile-related bacteria (Schlöppnerbrunnen I soil clones SbIDsmon2, 3, 4, 5, and 8 Cadagno Lake clones 618, 624, 626, 650, and 651) |
DSMON1283 | Uncultured Desulfomonile-related bacteria (Schlöppnerbrunnen I soil clones SbIDsmon2, 3, 4, 5, and 8) |
DSMON447 | Uncultured Desulfomonile-related bacteria (Schlöppnerbrunnen I soil clones SbIDsmon3, 5, and 8) |
DSMON468a | Uncultured Desulfomonile-related bacteria (Schlöppnerbrunnen I soil clones SbIDsmon3, 5, and 8) |
DSMON446 | Uncultured Desulfomonile-related bacteria (Schlöppnerbrunnen I soil clones SbIDsmon2 and 4) |
DSMON468b | Uncultured Desulfomonile-related bacteria (Schlöppnerbrunnen I soil clones SbIDsmon2 and 4) |
OalgDEL136 | Deltaproteobacterial symbiont of Olavius algarvensis |
DSV (DSV321) | Some Desulfovibrionaceae, Desulfomicrobiaceae, Desulfohalobiaceae, and other Bacteria |
DSC213 | Desulfocapsa thiozymogenes |
DSC441 | Few Desulfocapsa |
SRB441 | Few Desulfobulbaceae |
DsmA455 | Desulfomonile-related Lake Cadagno clones 618, 624, 626, and 651 |
DsmB455 | Desulfomonile-related Lake Cadagno clone 650 |
Ih820 | Desulfotomaculum subcluster Ih (Pelotomaculum and Cryptanaerobacter) |
DSS449 | Some Desulfosarcina |
DSS138 | Few Desulfobacteraceae |
DSR1256 | Few Desulfobulbaceae |
Dblb1243 | Desulfobacterium catecholicum-related strains LacK1, LacK4 and LacK9 |
Dcap1031 | Few Desulfocapsa including strain LacK10 |
Dblb1032 | Desulfobacterium catecholicum and related strains LacK1 and LacK9 |
Dsr186 | Desulfobacterium catecholicum and related strains LacK1 and LacK9 |
DSV185 | Desulfovibrio acrylicus |
DSV445 | Desulfovibrio strain EtOHK3 |
DSV64 | Desulfovibrio strain EtOHK2 |
OcraDEL1 | Deltaproteobacterial symbiont 1 of Olavius crassitunicatus |
OcraDEL2 | Deltaproteobacterial symbiont 2 of Olavius crassitunicatus |
OcraDEL3 | Deltaproteobacterial symbiont 3 of Olavius crassitunicatus |
DSBAC357 | Most Desulfobacteraceae and Syntrophobacteraceae |
DSV827 | members of the genus Desulfovibrio |
DSBA1017 | Desulfobacca acetoxidans |